Package com.macrofocus.high_d.controlchart

Class ControlChartScatterPlotModel<Color,Row,C>

java.lang.Object

com.macrofocus.high_d.scatterplot.AbstractScatterPlotModel<Color,Row,C>

com.macrofocus.high_d.controlchart.ControlChartScatterPlotModel<Color,Row,C>

All Implemented Interfaces:

ScatterPlotModel<Color,Row,C>, com.macrofocus.visual.VisualObjects<Row>

public class ControlChartScatterPlotModel<Color,Row,C>
extends AbstractScatterPlotModel<Color,Row,C>
implements com.macrofocus.visual.VisualObjects<Row>

Constructor Summary

Constructors

Constructor	Description
ControlChartScatterPlotModel(com.macrofocus.crossplatform.CPFactory factory, com.macrofocus.colormap.ColorMapFactory<Color> colorMapFactory, com.macrofocus.molap.dataframe.DataFrame<Row,C,?> dataFrame)
ControlChartScatterPlotModel(com.macrofocus.crossplatform.CPFactory factory, com.macrofocus.molap.dataframe.DataFrame<Row,C,?> dataFrame, com.macrofocus.visual.Visual<Color,Row,C> visual)
ControlChartScatterPlotModel(com.macrofocus.molap.dataframe.DataFrame<Row,C,?> dataFrame, com.macrofocus.molap.dataframe.DataFrame<?,C,?> annotationDataFrame, com.macrofocus.visual.Visual<Color,Row,C> visual, com.macrofocus.high_d.axis.group.AxisGroupModel<Row,C> axisGroupModel)

Method Summary

Modifier and Type	Method	Description
protected org.apache.commons.math3.linear.RealMatrix	computeCovarianceMatrix(org.apache.commons.math3.linear.RealMatrix matrix, boolean biasCorrected)
java.lang.Number	computeT2(Row row)
double	covariance(double[] xArray, double[] yArray, boolean biasCorrected)
com.macrofocus.molap.dataframe.DataFrame	getAnnotationDataFrame()
com.macrofocus.high_d.axis.group.AxisGroupModel	getAxisGroupModel()
com.macrofocus.coloring.MutableColoring<Color,Row>	getColoring()	Gets model holding the colors of each object.
com.macrofocus.colormapping.MutableColorMapping<Color,Row,C>	getColorMapping()	Gets model holding the color mapping of each object.
com.macrofocus.molap.dataframe.DataFrame	getDataFrame()
Filter<Row>	getFilter()	Obtains the model used for filtering objects in the scatter plot.
Row	getObject(int index)
int	getObjectCount()	Returns the number of data objects (typically rows).
MutableSingleSelection<Row>	getProbing()	Obtains the model used for probing objects in the scatter plot (aka mouse over).
MutableSelection<Row>	getSelection()	Obtains the model used for selecting objects in the scatter plot.
MutableSingleSelection<com.macrofocus.high_d.axis.AxisModel>	getSize()
com.macrofocus.high_d.axis.AxisModel	getSizeAxisModel()
com.macrofocus.visual.Visual<Color,Row,C>	getVisual()
MutableSingleSelection<com.macrofocus.high_d.axis.AxisModel<Row,C>>	getX()
com.macrofocus.high_d.axis.AxisModel	getXAxisModel()
MutableSingleSelection<com.macrofocus.high_d.axis.AxisModel<Row,C>>	getY()
MutableSingleSelection<com.macrofocus.high_d.axis.AxisModel<Row,C>>	getY2()
com.macrofocus.high_d.axis.AxisModel	getY2AxisModel()
com.macrofocus.high_d.axis.AxisModel	getYAxisModel()
protected double	mean(double[] values)
void	update(org.apache.commons.math3.linear.RealMatrix matrix)
protected double	variance(double[] values, boolean isBiasCorrected)
protected double	variance(double[] values, double mean, boolean isBiasCorrected)

Methods inherited from class com.macrofocus.high_d.scatterplot.AbstractScatterPlotModel

addScatterPlotListener, fireScatterPlotChanged, removeScatterPlotListener

Methods inherited from class java.lang.Object

clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait

Constructor Detail

ControlChartScatterPlotModel

public ControlChartScatterPlotModel(com.macrofocus.crossplatform.CPFactory factory,
                                    com.macrofocus.colormap.ColorMapFactory<Color> colorMapFactory,
                                    com.macrofocus.molap.dataframe.DataFrame<Row,C,?> dataFrame)

ControlChartScatterPlotModel

public ControlChartScatterPlotModel(com.macrofocus.crossplatform.CPFactory factory,
                                    com.macrofocus.molap.dataframe.DataFrame<Row,C,?> dataFrame,
                                    com.macrofocus.visual.Visual<Color,Row,C> visual)

ControlChartScatterPlotModel

public ControlChartScatterPlotModel(com.macrofocus.molap.dataframe.DataFrame<Row,C,?> dataFrame,
                                    com.macrofocus.molap.dataframe.DataFrame<?,C,?> annotationDataFrame,
                                    com.macrofocus.visual.Visual<Color,Row,C> visual,
                                    com.macrofocus.high_d.axis.group.AxisGroupModel<Row,C> axisGroupModel)

Method Detail

update

public void update(org.apache.commons.math3.linear.RealMatrix matrix)

mean

protected double mean(double[] values)

variance

protected double variance(double[] values,
                          boolean isBiasCorrected)

variance

protected double variance(double[] values,
                          double mean,
                          boolean isBiasCorrected)

computeCovarianceMatrix

protected org.apache.commons.math3.linear.RealMatrix computeCovarianceMatrix(org.apache.commons.math3.linear.RealMatrix matrix,
                                                                             boolean biasCorrected)
                                                                      throws org.apache.commons.math3.exception.MathIllegalArgumentException

Throws:

org.apache.commons.math3.exception.MathIllegalArgumentException

covariance

public double covariance(double[] xArray,
                         double[] yArray,
                         boolean biasCorrected)
                  throws org.apache.commons.math3.exception.MathIllegalArgumentException

Throws:

org.apache.commons.math3.exception.MathIllegalArgumentException

computeT2

public java.lang.Number computeT2(Row row)

getVisual

public com.macrofocus.visual.Visual<Color,Row,C> getVisual()

Specified by:

getVisual in interface ScatterPlotModel<Color,Row,C>

getAxisGroupModel

public com.macrofocus.high_d.axis.group.AxisGroupModel getAxisGroupModel()

Specified by:

getAxisGroupModel in interface ScatterPlotModel<Color,Row,C>

getProbing

public MutableSingleSelection<Row> getProbing()

Description copied from interface: ScatterPlotModel

Obtains the model used for probing objects in the scatter plot (aka mouse over).

Specified by:

getProbing in interface ScatterPlotModel<Color,Row,C>

Returns:

the model used for probing.

getSelection

public MutableSelection<Row> getSelection()

Description copied from interface: ScatterPlotModel

Obtains the model used for selecting objects in the scatter plot.

Specified by:

getSelection in interface ScatterPlotModel<Color,Row,C>

Returns:

the model used for selection.

getFilter

public Filter<Row> getFilter()

Description copied from interface: ScatterPlotModel

Obtains the model used for filtering objects in the scatter plot.

Specified by:

getFilter in interface ScatterPlotModel<Color,Row,C>

Returns:

the model used for filtering.

getColorMapping

public com.macrofocus.colormapping.MutableColorMapping<Color,Row,C> getColorMapping()

Description copied from interface: ScatterPlotModel

Gets model holding the color mapping of each object.

Specified by:

getColorMapping in interface ScatterPlotModel<Color,Row,C>

Returns:

the model holding the color of each object.

getColoring

public com.macrofocus.coloring.MutableColoring<Color,Row> getColoring()

Description copied from interface: ScatterPlotModel

Gets model holding the colors of each object.

Specified by:

getColoring in interface ScatterPlotModel<Color,Row,C>

Returns:

the model holding the color of each object.

getObjectCount

public int getObjectCount()

Description copied from interface: ScatterPlotModel

Returns the number of data objects (typically rows).

Specified by:

getObjectCount in interface ScatterPlotModel<Color,Row,C>

Specified by:

getObjectCount in interface com.macrofocus.visual.VisualObjects<Color>

Returns:

the number of data objects

getObject

public Row getObject(int index)

Specified by:

getObject in interface ScatterPlotModel<Color,Row,C>

Specified by:

getObject in interface com.macrofocus.visual.VisualObjects<Color>

Returns:

getXAxisModel

public com.macrofocus.high_d.axis.AxisModel getXAxisModel()

Specified by:

getXAxisModel in interface ScatterPlotModel<Color,Row,C>

getY2AxisModel

public com.macrofocus.high_d.axis.AxisModel getY2AxisModel()

Specified by:

getY2AxisModel in interface ScatterPlotModel<Color,Row,C>

getYAxisModel

public com.macrofocus.high_d.axis.AxisModel getYAxisModel()

Specified by:

getYAxisModel in interface ScatterPlotModel<Color,Row,C>

getSizeAxisModel

public com.macrofocus.high_d.axis.AxisModel getSizeAxisModel()

Specified by:

getSizeAxisModel in interface ScatterPlotModel<Color,Row,C>

getX

public MutableSingleSelection<com.macrofocus.high_d.axis.AxisModel<Row,C>> getX()

Specified by:

getX in interface ScatterPlotModel<Color,Row,C>

getY

public MutableSingleSelection<com.macrofocus.high_d.axis.AxisModel<Row,C>> getY()

Specified by:

getY in interface ScatterPlotModel<Color,Row,C>

getY2

public MutableSingleSelection<com.macrofocus.high_d.axis.AxisModel<Row,C>> getY2()

Specified by:

getY2 in interface ScatterPlotModel<Color,Row,C>

getSize

public MutableSingleSelection<com.macrofocus.high_d.axis.AxisModel> getSize()

Specified by:

getSize in interface ScatterPlotModel<Color,Row,C>

getDataFrame

public com.macrofocus.molap.dataframe.DataFrame getDataFrame()

Specified by:

getDataFrame in interface ScatterPlotModel<Color,Row,C>

getAnnotationDataFrame

public com.macrofocus.molap.dataframe.DataFrame getAnnotationDataFrame()

Specified by:

getAnnotationDataFrame in interface ScatterPlotModel<Color,Row,C>